USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: PCBP1_HUMAN USC-OGP 2-DE database:  PCBP1_HUMAN PCBP1_HUMAN General information about the entry View entry in simple text format Entry name PCBP1_HUMAN Primary accession number Q15365 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1; AltName: Full=Heterogeneous nuclear ribonucleoprotein E1; Short=hnRNP E1; AltName: Full=Nucleic acid-binding protein SUB2.3;. Gene name Name=PCBP1 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_4-7 {PLATELET 4-7} Homo sapiens (Human)   map experimental info   PLATELET_4-7 MAP LOCATIONS: SPOT OGP-0431: pI=6.35; Mw=40313 PLATELET_6-11 {PLATELET 6-11} Homo sapiens (Human)   map experimental info   PLATELET_6-11 MAP LOCATIONS: SPOT OGP-0957: pI=6.71; Mw=39701 UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1195: pI=6.77; Mw=40578 SPOT OGP-1196: pI=6.47; Mw=40351 SPOT OGP-1198: pI=6.93; Mw=39899 SPOT OGP-1200: pI=7.15; Mw=39675 Cross-references UniProtKB/Swiss-Prot Q15365; PCBP1_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name PCBP1_HUMAN Primary accession number Q15365 Secondary accession number(s) Q13157 Q14975 Sequence was last modified on  February 16, 2004 (version 2) Annotations were last modified on  March 15, 2017 (version 174) Name and origin of the protein Description RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1; AltName: Full=Heterogeneous nuclear ribonucleoprotein E1; Short=hnRNP E1; AltName: Full=Nucleic acid-binding protein SUB2.3; Gene name Name=PCBP1 Encoded on Name=PCBP1 Keywords 3D-structure; Acetylation; Complete proteome; Cytoplasm; Direct protein sequencing; DNA-binding; Nucleus; Phosphoprotein; Reference proteome; Repeat; Ribonucleoprotein; RNA-binding; Viral RNA replication. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL X78137; CAA55016.1; -; mRNA EMBL U24223; AAA91317.1; -; mRNA EMBL Z29505; CAA82631.1; ALT_FRAME; mRNA EMBL BC039742; AAH39742.1; -; mRNA CCDS CCDS1898.1; -; . RefSeq NP_006187.2; NM_006196.3; . UniGene Hs.2853; -; . PDB 1WVN; X-ray; 2.10 A; A=279-356 PDB 1ZTG; X-ray; 3.00 A; A/B/C/D=14-85 PDB 3VKE; X-ray; 1.77 A; A/B/C/D=14-86 PDBsum 1WVN; -; . PDBsum 1ZTG; -; . PDBsum 3VKE; -; . ProteinModelPortal Q15365; -; . SMR Q15365; -; . BioGrid 111126; 169; . DIP DIP-38136N; -; . IntAct Q15365; 88; . MINT MINT-96267; -; . STRING 9606.ENSP00000305556; -; . iPTMnet Q15365; -; . PhosphoSitePlus Q15365; -; . SwissPalm Q15365; -; . BioMuta PCBP1; -; . DMDM 42560548; -; . OGP Q15365; -; . REPRODUCTION-2DPAGE IPI00016610; -; . UCD-2DPAGE Q15365; -; . EPD Q15365; -; . PaxDb Q15365; -; . PeptideAtlas Q15365; -; . PRIDE Q15365; -; . DNASU 5093; -; . Ensembl ENST00000303577; ENSP00000305556; ENSG00000169564; . GeneID 5093; -; . KEGG hsa:5093; -; . CTD 5093; -; . DisGeNET 5093; -; . GeneCards PCBP1; -; . HGNC HGNC:8647; PCBP1; . HPA CAB037113; -; . HPA HPA043803; -; . HPA HPA068497; -; . MIM 601209; gene; . neXtProt NX_Q15365; -; . OpenTargets ENSG00000169564; -; . PharmGKB PA32986; -; . eggNOG KOG2190; Eukaryota; . eggNOG ENOG410XNN8; LUCA; . GeneTree ENSGT00760000119144; -; . HOGENOM HOG000182823; -; . HOVERGEN HBG053520; -; . InParanoid Q15365; -; . KO K12889; -; . OMA TIAGMPQ; -; . OrthoDB EOG091G0DHI; -; . PhylomeDB Q15365; -; . TreeFam TF318292; -; . Reactome R-HSA-72163; mRNA Splicing - Major Pathway; . Reactome R-HSA-72203; Processing of Capped Intron-Containing Pre-mRNA; . ChiTaRS PCBP1; human; . EvolutionaryTrace Q15365; -; . GeneWiki PCBP1; -; . GenomeRNAi 5093; -; . PRO PR:Q15365; -; . Proteomes UP000005640; Chromosome 2; . Bgee ENSG00000169564; -; . CleanEx HS_PCBP1; -; . ExpressionAtlas Q15365; baseline and differential; . Genevisible Q15365; HS; . GO GO:0005737; C:cytoplasm; IDA:BHF-UCL; . GO GO:0005829; C:cytosol; IDA:HPA; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0016020; C:membrane; IDA:UniProtKB; . GO GO:0016607; C:nuclear speck; IDA:HPA; . GO GO:0005654; C:nucleoplasm; IDA:HPA; . GO GO:0000932; C:P-body; IDA:HPA; . GO GO:0045296; F:cadherin binding; IDA:BHF-UCL; . GO GO:0003729; F:mRNA binding; IDA:BHF-UCL; . GO GO:0003723; F:RNA binding; IDA:UniProtKB; . GO GO:0000981; F:RNA polymerase II transcription factor activity; sequence-specific DNA binding; IEA:Ensembl GO GO:0098847; F:sequence-specific single stranded DNA binding; IEA:Ensembl; . GO GO:0003697; F:single-stranded DNA binding; IDA:UniProtKB; . GO GO:0010467; P:gene expression; TAS:Reactome; . GO GO:0000398; P:mRNA splicing; via spliceosome; TAS:Reactome GO GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl; . GO GO:0039694; P:viral RNA genome replication; IDA:UniProtKB; . Gene3D 3.30.1370.10; -; 3; . InterPro IPR004087; KH_dom; . InterPro IPR004088; KH_dom_type_1; . Pfam PF00013; KH_1; 3; . SMART SM00322; KH; 3; . SUPFAM SSF54791; SSF54791; 3; . PROSITE PS50084; KH_TYPE_1; 3; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

[Home]